Publications

Caroline Filan, Madison Green, Abigail Diering, Marcus T. Cicerone, Lily S. Cheung, Joel E. Kostka & Francisco E. Robles (2024). Label-free functional analysis of root-associated microbes with dynamic quantitative oblique back-illumination microscopy. Scientific Reports, 14, 5812.

Sojeong Gwon, Jihyun Park, AKM Mahmudul Huque, and Lily S. Cheung (2023). The Arabidopsis SWEET1 and SWEET2 uniporters recognize similar substrates while differing in subcellular localization. Journal of Biological Chemistry, 299, 12, 105389 [* Equal contribution]

Yan Gong, Lily S. Cheung, and Elena M. Kramer (2023). Decoding the black essence of Melianthus nectar. New Phytologist, 239: 1542-1544.

Jihyun Park, Ryan G. Abramowitz, Sojeong Gwon, and Lily S. Cheung (2023). Exploring the substrate specificity of a sugar transporter with biosensors and cheminformatics. ACS Synthetic Biology, 12, 2: 565–571.

Jihyun Park, Gozde S. Demirer, Lily S. Cheung (2022). Toolboxes for plant systems biology research. Current Opinion in Biotechnology, 75: 102692.

Jihyun Park, Taylor M. Chavez, Jordan A. Guistwhite, Sojeong Gwon, Wolf B. Frommer, Lily S. Cheung (2022). Development and quantitative analysis of a biosensor based on the Arabidopsis SWEET1 sugar transporter. PNAS, 119(4): e2119183119.

Xueyi Xue, Jiang Wang, Diwakar Shukla, Lily S. Cheung, Li-Qing Chen (2022). When SWEETs turn tweens: Updates and perspectives. Annual Review of Plant Biology, 73: 379-403.

Yan Gong, Julien Alassimone, Rachel Varnau, Nidhi Sharma, Lily S Cheung, Dominique C Bergmann (2021). Tuning self-renewal in the Arabidopsis stomatal lineage by hormone and nutrient regulation of asymmetric cell division. eLife, 10: e63335.

Yan Gong, Rachel Varnau, Eva-Sophie Wallner, Raghav Acharya, Dominique C Bergmann, and Lily S Cheung (2021). Quantitative and dynamic cell polarity tracking in plant cells. New Phytologist, 230: 867-877.

Brian B. Merritt and Lily S. Cheung (2019). GRIBCG: a software for selection of sgRNAs in the design of balancer chromosomes. BMC Bioinformatics, 20: 122.

Yuyong Tao, Lily S Cheung, Shuo Li, Joon-Seob Eom, Li-Qing Chen, Yan Xu, Kay Perry, Wolf B Frommer, and Liang Feng (2015). Structure of a eukaryotic SWEET transporter in a homotrimeric complex. Nature, 527 (7577): 259–263. [* Equal contribution]

Li-Qing Chen, Lily S. Cheung, Liang Feng, Widmar Tanner, and Wolf B. Frommer (2015). Transport of sugars. Annual Review of Biochemistry, 84: 865–894. [*Equal contribution]

Lily S. Cheung and Stanislav Y. Shvartsman (2015). A multiplex fluorescent in situ hybridization method for clonal analysis of Drosophila oogenesis. Tissue Morphogenesis (Methods in Molecular Biology series): 115–122.

Enrica Charbonnier, Alisa Fuchs, Lily S. Cheung, Mrinal Chayengia, Ville Veikkolainen, Janine Seyfferth, Stanislav Y. Shvartsman, George Pyrowolakis (2015). BMP-dependent gene repression cascade in Drosophila eggshell patterning. Developmental Biology, 400: 258–265.

Yan Xu, Yuyong Tao, Lily S. Cheung, Chao Fan, Li-Qing Chen, Sophia Xu, Kay Perry, Wolf B. Frommer and Liang Feng (2014). Structures of bacterial homologues of SWEET transporters in two distinct conformations. Nature, 515: 448–452. [Equal contribution]

Lily S. Cheung, David S. Simakov, Alisa Fuchs, George Pyrowolakis, and Stanislav Y. Shvartsman (2013). Dynamic model for the coordination of two enhancers of broad by EGFR signaling. PNAS, 110 (44): 17939–17944. [*Equal contribution].

Alisa Fuchs, Lily S. Cheung, Enrica Charbonnier, Stanislav Y. Shvartsman and George Pyrowolakis (2012). Transcriptional interpretation of the EGF receptor signaling gradient. PNAS, 109 (5): 1572–1577. [Equal contribution]

David S. Simakov, Lily S. Cheung, Len M. Pismen and Stanislav Y. Shvartsman (2012). EGFR-dependent network interactions that pattern Drosophila eggshell appendages. Development 139: 2814–2820.

Lily S. Cheung, Trudi Schüpbach and Stanislav Y. Shvartsman (2011). Pattern formation by receptor tyrosine kinases: analysis of the Gurken gradient in Drosophila oogenesis. Current Opinion in Genetics and Development 21: 1–7.

Jeremiah J. Zartman, Lily S. Cheung, Matthew G. Niepielko, Christine Bonini, Benjamin Haley, Nir Yakoby and Stanislav Y. Shvartsman (2011). Pattern formation by a moving morphogen source. Physical Biology 8, 4 [*Equal contribution].

Jeremiah J. Zartman, Jitedra S. Kanodia, Lily S. Cheung and Stanislav Y. Shvartsman (2009). Feedback control of the EGFR signaling gradient: superposition of domain-splitting events in Drosophila oogenesis. Development 136: 2903– 2911.